A research plan on huntingtin protein research


   Huntingtin's role on neuronal apoptosis
Abstract:

    Huntington*s disease is an autosomal dominant neuro-degenerative disorder
caused by an expanding polyglutamine repeat in the huntingtin gene. Though
huntingtin is widely expressed and is required for normal development, the
pathology of HD is restricted to the brain.

Huntingtin-associated protein-1 (HAP-1) was found by Li et al(1995) to be enriched in brain. It*s capability of binding to huntingtin is enhanced with the length of CAG repeats, suggesting a possible basis for the selective brain pathology of HD.

Apopain , a human counterpart of the nematode cysteine protease death-gene product, has a key role in proteolytic events leading to apoptosis. Goldberg et al showed that apoptotic extract , and apopain itself ,specifically, cleave huntingtin. The rate of cleavage increased with the length of the polyglutamine tract , providing an explanation for the gain-of function associated with CAG expansion.

Gutekunst et al(1995) found that huntingtin was associated with microtrbules, indicating the mutation impairs the cytoskeletal anchoring or transport of organelles or molecules.

Based on the above facts, we postulate that huntingtin might play a vital role in neuronal apoptosis of Huntingtin*s disease. The presumed pathway is as follows: HAP1/Apopain ---* block/degrade huntingtin (related to polyglutamine tract length) ---* lose inhibitory functions ----* apoptosis begins or accelarates Two sets of experiments are applied to prove the hypothesis. Firstly, induce neuronal and somatic apoptosis with TNF or Glutamate. Assay the calcium concentration intracellularly and observe the extent of cell death under SEM. Secondly, incorporate huntingtin gene (with variant repeat numbers of CAG tract) into YAC vectors, transfect the vector into both neurons and somatic cells then repeat the first experiment to see of the overexpressed huntingtin slows down apoptosis. Thirdly, coexpress hap1 and huntingtin (with variant repeat numbers of CAG tract) genes in both cells, iterate the first experiments. If the result appears that huntingtin decreases the range of apoptosis or calcium concentration, we can conclude that huntingtin is an apopaosis inhibiting protein. And then hap1-huntingtin coexpressing experiment shows whether HAP1 block huntingtin protein*s inhibitory functions.
br> Introduction:

Huntington*s disease is a nearly completely penetrant autosomal dominant neurodegenerative disease that is characterized by psychiatric disorders, demantia, and involuntary movements. The typical age of onset of HD is in the fourth and fifth decades of life and the average duration of disease is 15 to 20 years. HD is currently incurable, and death results usually from infectious complications of immobility. The social and emotional impact of HD is disproportionately greater than its prevalence because of its onset in the priming working years, the prolonged and progressive course and the familial nature of the disease.

Molecular genetics of HD

McLaughlin et al. (1996) reported that cytoplasmic protein extracts from several rat brain regions, including striatum and cortex (sites of neuronal degeneration in HD), contain a 63 kD RNA-binding protein that interacts specifically with CAG repeat sequences. They noted that the protein RNA interactions are dependent upon the length of the CAG repeat, and that longer repeats bind substantially more protein. McLaughlin et al. (1996) identified 2 CAG binding proteins in human cortex and striatum, one of 63 kD and another of 49 kD. They concluded that these data suggest mechanisms by which RNA binding proteins may be involved in the pathological course of trinucleotide-associated neurological diseases.

Myers et al (1989) performed molecular genetic studies in 4 offsprings of 3 different affected x affected matings for possible homozygosity. One of the 4 was found to have a 95% likelihood of being an HD homozygote. The individuals*s age at onset and symptoms were similar to those in affected HD heterozygous relatives. Thus, the findings from the New England Huntington Disease Research Center corroborated the findings of Wexler et al (1987). Harper et al (1985) stated that the polymorphism with 4 enzymes (HindIII, EcoRI, NciI, and BstI) applied to the G8 locus shows that over 80% of subjects are heterozygous. They further stated the latest estimate of the interval between the G8 and the HD loci is 5 cM. In 16 British kindreds , Youngman et al (1986) found 2 recombinants yielding a maximum lod score of 17.6 at theta 0.02. This is more evidence against multilocus heterogeneity in HD.

The Huntington's Disease Collaborative Research Group (1993) found that a "new" gene, designated IT15 (important transcript 15) and later called huntingtin, which was isolated using cloned trapped exons from the target area, contains a polymorphic trinucleotide repeat that is expanded and unstable on HD chromosomes. A (CAG)n repeat longer than the normal range was observed on HD chromosomes from all 75 disease families examined. The families came from a variety of ethnic backgrounds and demonstrated a variety of 4p16.3 haplotypes. The (CAG)n repeat appeared to be located within the coding sequence of a predicted protein of about 348 kD that is widely expressed but unrelated to any known gene. Thus it turned out that the HD mutation involves an unstable DNA segment similar to those previously observed in several disorders, including the fragile X syndrome, Kennedy syndrome, and myotonic dystrophy.

The fact that the phenotype of HD is completely dominant suggests that the disorder results from a gain-of-function mutation in which either the mRNA product or the protein product of the disease allele has some new property or is expressed inappropriately (Myers et al., 1989). (According to the tabulation of Parrish and Nelson (1993), HD was the 21st genetic disorder of previously unknown basic biochemical defect in which the gene was isolated by positional cloning.

MacDonald et al. (1993) found that unlike the similar CCG repeat in the fragile X syndrome, the expanded HD repeat shows no evidence of somatic instability in a comparison of blood, lymphoblast, and brain DNA from the same persons. Furthermore, 4 pairs of monozygotic HD twins displayed identical CAG repeat lengths, suggesting that repeat size is determined in gametogenesis. However, in contrast to the fragile X syndrome and with HD somatic tissue, mosaicism was readily detected as a diffuse spread of repeat lengths in DNA from HD sperm samples. Thus, the developmental timing of repeat instability appears to differ between HD and fragile X syndrome, indicating perhaps that the fundamental mechanisms leading to repeat expansion are distinct. Goldberg et al. (1993) reported findings in 3 families in which a new mutation for HD had arisen. In all 3 families, a parental intermediate allele (with expansion to 30-38 CAG repeats, greater than that seen in the population but below the range seen in patients with HD) had expanded in more than 1 offspring. In one of the families, 2 sibs with the expanded CAG repeat were clinically affected with HD, thus presenting a pseudorecessive pattern of inheritance.

Zuhlke et al. (1993) studied the length variation of the repeat in 513 non-HD chromosomes from normal individuals and HD patients; the group comprised 23 alleles with 11 to 33 repeats. In an analysis of the inheritance of the (CAG)n stretch, they found meiotic instability for HD alleles, (CAG)40 to (CAG)75, with a mutation frequency of approximately 70%; following the HD allele in 38 pedigrees during 54 meioses, they found a ratio of stable to altered copy number of 15:39. On the other hand, in 431 meioses of normal alleles, only 2 expansions were identified. They found that the risk of expansion during spermatogenesis was enhanced compared to oogenesis, explaining juvenile onset by transmission from affected fathers. No mosaicism or differences in repeat lengths were observed in the DNA from different tissues, including brain and lymphocytes of 2 HD patients, indicating mitotic stability of the mutation. Thus, the determination of the repeat number in the DNA of blood lymphocytes is probably representative of all tissues in a patient.

Andrew et al. (1994) found that 30 of 1,022 persons with HD (2.9%) did not have an expanded CAG repeat in the disease range. They showed that most of these individuals with normal sized alleles, namely 18, represented misdiagnosis, sample mix-up, or clerical error. The remaining 12 patients represented possible phenocopies for HD. In at least 4 cases, family studies of these phenocopies excluded 4p16.3 as the region responsible for the phenotype. Mutations in the HD gene other than CAG expansion have not been excluded for the remaining 8 cases; however, in as many as 7 of these patients, retrospective review of their clinical features identified characteristics not typical for HD. Andrew et al. (1994) concluded that on rare occasions mutations in other, as-yet-undefined genes can present with a clinical phenotype very similar to that of HD.

Research Plan
Rationale Based on three facts below we postulate that huntingtin is crucial in pathological apoptosis in HD:
(1) The length of polyglutamine tract determines the age of onset and the severity of symptoms.
(2) HD is caused by neuronal apoptosis within CNS.
(3) HAP1,apopain and GAPD increase affinity for huntingtin with the length of polyglutamine tract. Among these proteins, apopain specifically cleaves huntingtin and the rate of cleavage increases as the polyglutamine tract extends.
(4) Huntingtin is particularly associated with microtubules. While taxol, a promoting chemical for tubulin polymerization, can cause apoptosis.
Consequently we presume that huntingtin might inhibit apoptosis or at least slow down the progress of it. There exist molecules that trigger apoptosis inside or outside cells especially when cells are aging. Huntingtin may play a role in aging neurons to prevent onset of apoptosis. Once huntingtin acquires abnormal length of polyglutamine tract, certain kinds of intracellular proteins such as HAP1 or apopain would soon bind to it and block the inhibitory functions. Apoptosis begins as a result.

The experiment design is as follows:
(1) TNF/Glu stimulates normal neurons/somatic cells * apoptosis? Ca2+ concentration?
TNF/Glu stimulates neurons/somatic cells with overexpressed huntingtins with variable lengths of polyglutamine repeats * survive?Ca2+ concentration?
(2) HAP1/huntintin-specific Ab microinject into neurons/somatic cells * TNF/Glu treatment * apoptosis? Ca2+ concentration?

Material and Method

Material: fresh rat brain neurons
Method:
I. Apoptosis observation: SEM
II. Assaing Ca2+: Fluorescent Calcium indicator - fura-2 fluorescence excitation spectrum
Titration: 5ml 100mM KCl + 10mM K-MOPS + 10mM K2H2EGTA + 1uM fura-2 * adjusting pH to 7.20 * recording the spectrum * discard 0.5ml * replace with 100mM KCl + 10mM K-MOPS + 10mM K2CaEGTA + 1uM fura-2 * readjust pH to 7.20 * record the spectrum * 9mM K2H2EGTA + 1mM K2CaEGTA * record * iterate to reach n mM CaEGTA + (10-n) mM EGTA ,n = 2~10, discarding 5.0/(11-n) ml and replace with equal volume of 10mM K2CaEGTA, 1uM fura-2 stock * after n = 10 has been reached to give a free Ca2+ between 10^-4 and 10^-5 M addition of 1mM CaCl2 has no further effect on the spectrum.
Calculation: [Ca2+] = f Kd (R-Rmin)/(Rmax-R)

III.HAP1 and Huntingtin expression:
Clone hap1 and huntingtin genes into YAC and then express them in neurons
Possible results and deductions
1. Huntingtin blocks apoptosis and HAP1/Apopain counteract against huntingtin * huntingtin is an inhibitor of neuronal apoptosis and HAP1/Apopain act as inducers of apoptosis by hindering huntintin*s funtions.

2. Huntinting blocks apoptosis but HAP1/Apopain don*t affect the effect * huntingtin is the inhibitor of apoptosis but HAP1/Apopain are not included.*HAP1/Apopain are either unrelated to the pathology of HD or are engaged in pathways other than apoptosis.
Further experiments:
(1)Knock out apopain or HAP1 gene to see if HD symptoms are alleviated.
(2) Continuously assay quantities of HAP1/apopain and measure relative quantities of either proteins binding to huntinting in the progress of apoptosis. Compare the data to relative ion concentration changes(Ca2+, Na+, H+, Cl-..etc) and second messanger concentrations.

3.Huntingtin does not block apoptosis * huntingtin is involved in other pathways
Further experiments
(1) Assay huntingtin*s interaction with telomerase
(2) Assay the amount of huntingtin in patients or long-repeat carriers at different ages to understand the relative quantity of huntingtin over time.
(3) Try to trigger expression of huntingtin gene with known transcription factors.

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