Sequence analysis of MLH1 protein. - To search protein file in SWISS-PROT Database - To use analysis tools in ExPASy
1. Search human MutL protein homolog 1, Mlh1, in SWISS-PROT database. Give its
(a) accession number : P40692
(b) entry name : MLH1_HUMAN
(b) release date of last modification : Release 31, February 1995
link
2. Give its number of amino acids, molecular weight and theoretical pI.
amino acids : 756aa
molecular weight : 84600.9Da
theoretical pI : 5.51
3. Calculate the total number of negatively charged residues and positively charged residues.
Total number of negatively charged residues (Asp + Glu): 104
Total number of positively charged residues (Arg + Lys): 83
4. Calculate its hydrophobicity (Kyte & Doolittle scale, window size 11, Relative weight 60%).
MIN: -3.443
MAX: 1.883 link
5. Performe the trypsin (higher specificity) cleavage of the protein.
(a) How many peptides will you get after cleavage? 33
(b) Give the list of peptides with a mass bigger than 1000 dalton.
list