ProtParam tool
User-provided sequence:
1 11 21 31 41 51
| | | | | |
1 GAAAAAAATA AAGAAAATGA ACAAACCCCA AACTATTTAT GAAAAGCTCG GAGGCGAAAA 60
61 TGCCATGAAG GCTGCCGTCC CTCTCTTCTA CAAGAAGGTC TTAGCTGATG AAAGAGTCAA 120
121 GCATTTCTTC AAGAACACCG ACATGGATCA CCAAACCAAG CAATAAACTG ACTTCCTCAC 180
181 CATGCTCTTA GGTGGTCCCA ACCATTACAA GGGTAAAAAT ATGACTGAAG CTCACAAGGG 240
241 TATGAACTTG CAAAACTTGC ACTTTGATGC CATCATTGAA AACCTTGCTG CTACCCTTAA 300
301 GGAGCTCGGT GTCACCGATG CTGTTATTAA CGAGGCTGCT AAGGTCATCG AACACACCCG 360
361 TAAGGATATG CTCGGCAAGT GAGATAGCTG CTGTTGCTGT TTATATTCTA CTATTATTAA 420
421 TTACTACTTA ACACATCATC AAATAAATAG TAATTCTACT CAATTAAACT TGTCAGATTT 480
481 CAATAAAAAT TATTTACTGT AATGAGAGTA TTTATTGTGT ATTGTTATGT ATCGTTTATT 540
541 GAAGATGATG ATCAAGACAA ATCCCATGGT ACCCGATCCT CGAATTC
References and documentation are available.
Number of amino acids: 587
Molecular weight: 49086.0
Theoretical pI: 5.18
Amino acid composition:
Ala (A) 198 33.7%
Arg (R) 0 0.0%
Asn (N) 0 0.0%
Asp (D) 0 0.0%
Cys (C) 121 20.6%
Gln (Q) 0 0.0%
Glu (E) 0 0.0%
Gly (G) 104 17.7%
His (H) 0 0.0%
Ile (I) 0 0.0%
Leu (L) 0 0.0%
Lys (K) 0 0.0%
Met (M) 0 0.0%
Phe (F) 0 0.0%
Pro (P) 0 0.0%
Ser (S) 0 0.0%
Thr (T) 164 27.9%
Trp (W) 0 0.0%
Tyr (Y) 0 0.0%
Val (V) 0 0.0%
Asx (B) 0 0.0%
Glx (Z) 0 0.0%
Xaa (X) 0 0.0%
Total number of negatively charged residues (Asp + Glu): 0
Total number of positively charged residues (Arg + Lys): 0
Atomic composition:
Carbon C 1821
Hydrogen H 3057
Nitrogen N 587
Oxygen O 752
Sulfur S 121
Formula: C1821H3057N587O752S121
Total number of atoms: 6338
Extinction coefficients:
Conditions: 6.0 M guanidium hydrochloride
0.02 M phosphate buffer
pH 6.5
Extinction coefficients are in units of M-1 cm-1 .
The first table lists values computed assuming ALL Cys
residues appear as half cystines, whereas the second table
assumes that NONE do.
276 278 279 280 282
nm nm nm nm nm
Ext. coefficient 8700 7620 7200 7200 7200
Abs 0.1% (=1 g/l) 0.177 0.155 0.147 0.147 0.147
276 278 279 280 282
nm nm nm nm nm
Ext. coefficient 0 0 0 0 0
Abs 0.1% (=1 g/l) 0.000 0.000 0.000 0.000 0.000
Estimated half-life:
The N-terminal of the sequence considered is G (Gly).
The estimated half-life is: 30 hours (mammalian reticulocytes, in vitro).
>20 hours (yeast, in vivo).
>10 hours (Escherichia coli, in vivo).
Instability index:
The instability index (II) is computed to be 48.44
This classifies the protein as unstable.
Aliphatic index: 33.73
Grand average of hydropathicity (GRAVY): 0.856