Retrieve: Sequence in plain, or Pearson/Fasta format.
Six Frame Translation (using the standard genetic code).
Perform:
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EMBL locus: HSCFINSCA
EMBL_LOCUS_ID: HSCFINSCA
DATACLASS: standard
MOLECULE: DNA
DIVISION: [PRI,Primates]
SEQ_LENGTH: 47
ACCESSION NUMS: M65197
DATES:
12-JUL-1991 (Rel. 28, Created)
16-DEC-1994 (Rel. 42, Last updated, Version 7)
DESCRIPTION:
Human cystic fibrosis (CFTR) gene, exon 13.
KEYWORDS: cystic fibrosis, mutation
ORG_SPECIES: Homo sapiens (human)
ORG_CLASSIFICATION:
[Eukaryota,Animalia,Metazoa,Chordata,Vertebrata,Mammalia,Theria,Eutheria,Primates,Haplorhini,Catarrhini,Hominidae]
ORG_ORGANELLE: []
EMBL_REFERENCES:
[1] ref number (RN): 1
ref comment (RC): null
ref position (RP): 1-47
ref link (RX): MEDLINE(91257839)
ref author (RA): White M.B., Krueger L.J., Holsclaw D.S.Jr., Gerrard B.C.,
Stewart C., Quittell L., Dolganov G., Baranov V.S.,
Ivaschenko T., Kapronov N.I., Sebastio G., Castiglione O.,
Dean M.
ref title (RT): 'Detection of three rare frameshift mutations in the cystic
fibrosis gene in an African-American (CF444delA), an Italian
(CF2522insC), and a Soviet (CF3821delT)'
ref location (RL): Genomics 10:266-269(1991).
DATABANK_REFS:
Cross reference to SWISS-PROT [P13569, CFTR_HUMAN]
COMMENT:
NCBI gi: 180285
FEATURES:
1) source 1..47
/organism=Homo sapiens
/sequenced_mol=DNA
2) exon 1..47
/gene=CFTR
/map=7q31-q32
/note=This sequence consists of a new frameshift mutation
in which an adenine is deleted in 3. Between the cytosine
at 25 and the thymine at 26, a cytosine has been inserted
in the mutant sequence; G00-120-584
/number=13
/codon_start=1
3) CDS <1..44
/gene=CFTR
/map=7q31-q32
/note=NCBI gi: 180286
/codon_start=3
/gdb_xref=G00-120-584
BASE_COUNT:
Sequence 47 BP; 14 A; 16 C; 9 G; 8 T; 0 other;
constituents:
HSCFINSCA[0,46,direct]
dna_sequence (of length 47):
1 CCACACGAAA AGTGTCACTG GCCCCCTCAG GCAAACTTGA CTGAACT
Link to "peptide" object id(['P13569',peptide])
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Query CPU time (in sec): 4.34e-01 Host machine: ala.dcrt.nih.gov Port: 7850
Div. of Computer Research & Technology / National Institutes of Health